Moving some things around, and may have fixed the Gson issue with MCPC+

src/main/java/com/pahimar/ee3/api/RecipeMapping.java

@@ -106,7 +106,6 @@ public class RecipeMapping implements JsonSerializer<RecipeMapping>, JsonDeseria
     @Override
     public JsonElement serialize(RecipeMapping recipeMapping, Type type, JsonSerializationContext context)
     {
-
         JsonObject jsonRecipeMapping = new JsonObject();
 
         Gson gsonWrappedStack = (new GsonBuilder()).registerTypeAdapter(WrappedStack.class, new WrappedStack()).create();

src/main/java/com/pahimar/ee3/api/WrappedStack.java

@@ -16,10 +16,8 @@ import java.util.ArrayList;
 import java.util.Comparator;
 import java.util.List;
 
-public class WrappedStack
+public class WrappedStack implements Comparable<WrappedStack>, JsonDeserializer<WrappedStack>, JsonSerializer<WrappedStack>
-        implements Comparable<WrappedStack>, JsonDeserializer<WrappedStack>
 {
-
     private static final Gson gsonSerializer = (new GsonBuilder()).registerTypeAdapter(WrappedStack.class, new WrappedStack()).create();
 
     @SuppressWarnings("unused")
@@ -245,7 +243,7 @@ public class WrappedStack
 
             if (wrappedStack != null && wrappedStack.getWrappedStack() != null)
             {
-                className = wrappedStack.getWrappedStack().getClass().getSimpleName();
+                className = wrappedStack.wrappedStack.getClass().getSimpleName();
                 this.stackSize = stackSize;
                 this.wrappedStack = wrappedStack.wrappedStack;
             }
@@ -300,6 +298,7 @@ public class WrappedStack
         return null;
     }
 
+    @SuppressWarnings("unused")
     public String toJson()
     {
         return gsonSerializer.toJson(this);
@@ -445,6 +444,27 @@ public class WrappedStack
         return false;
     }
 
+    @Override
+    public JsonElement serialize(WrappedStack wrappedStack, Type type, JsonSerializationContext context)
+    {
+        JsonObject jsonWrappedStack = new JsonObject();
+
+        Gson gsonWrappedStack = new Gson();
+
+        jsonWrappedStack.addProperty("className", wrappedStack.className);
+        jsonWrappedStack.addProperty("stackSize", wrappedStack.stackSize);
+        if (gsonWrappedStack != null)
+        {
+            jsonWrappedStack.add("wrappedStack", gsonWrappedStack.toJsonTree(wrappedStack.wrappedStack));
+        }
+        else
+        {
+            jsonWrappedStack.add("wrappedStack", JsonNull.INSTANCE);
+        }
+
+        return jsonWrappedStack;
+    }
+
     /**
      *
      */

src/main/java/com/pahimar/ee3/emc/EmcRegistry.java

@@ -4,8 +4,8 @@ import com.google.common.collect.ImmutableSortedMap;
 import com.pahimar.ee3.api.OreStack;
 import com.pahimar.ee3.api.WrappedStack;
 import com.pahimar.ee3.helper.EmcHelper;
-import com.pahimar.ee3.item.crafting.RecipeRegistry;
 import com.pahimar.ee3.lib.Compare;
+import com.pahimar.ee3.recipe.RecipeRegistry;
 import net.minecraft.item.ItemStack;
 import net.minecraftforge.oredict.OreDictionary;
 

src/main/java/com/pahimar/ee3/handler/CraftingHandler.java

@@ -1,20 +1,16 @@
 package com.pahimar.ee3.handler;
 
-import com.pahimar.ee3.block.ModBlocks;
 import com.pahimar.ee3.configuration.ConfigurationSettings;
 import com.pahimar.ee3.helper.ItemStackNBTHelper;
-import com.pahimar.ee3.item.ModItems;
 import com.pahimar.ee3.item.crafting.RecipesAlchemicalBagDyes;
+import com.pahimar.ee3.item.crafting.RecipesEquivalentExchange;
 import com.pahimar.ee3.lib.Strings;
 import cpw.mods.fml.common.ICraftingHandler;
 import cpw.mods.fml.common.registry.GameRegistry;
-import net.minecraft.block.Block;
 import net.minecraft.entity.player.EntityPlayer;
 import net.minecraft.inventory.IInventory;
-import net.minecraft.item.Item;
 import net.minecraft.item.ItemStack;
 import net.minecraft.item.crafting.CraftingManager;
-import net.minecraftforge.oredict.ShapedOreRecipe;
 
 /**
  * Equivalent-Exchange-3
@@ -34,8 +30,7 @@ public class CraftingHandler implements ICraftingHandler
         CraftingManager.getInstance().getRecipeList().add(new RecipesAlchemicalBagDyes());
 
         // Register our recipes
-        initBlockRecipes();
+        RecipesEquivalentExchange.init();
-        initItemRecipes();
     }
 
     @Override
@@ -98,28 +93,4 @@ public class CraftingHandler implements ICraftingHandler
             openStone.damageItem(ConfigurationSettings.TRANSMUTE_COST_ITEM, player);
         }
     }
-
-    private static void initBlockRecipes()
-    {
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 0), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 0)});
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 1), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 1)});
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 2), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 2)});
-
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.chalk), new Object[]{"bcb", "cbc", "bcb", 'b', new ItemStack(Item.dyePowder.itemID, 1, 15), 'c', new ItemStack(Item.clay)});
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.chalk), new Object[]{"cc", "cc", 'c', new ItemStack(ModItems.chalk)});
-
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.glassBell), new Object[]{"iii", "i i", "i i", 'i', Block.glass});
-        GameRegistry.addRecipe(new ItemStack(ModBlocks.aludelBase), new Object[]{"iii", "sis", "iii", 'i', Item.ingotIron, 's', Block.stone});
-    }
-
-    private static void initItemRecipes()
-    {
-        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 0), new ItemStack(ModBlocks.alchemicalFuel, 1, 0));
-        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 1), new ItemStack(ModBlocks.alchemicalFuel, 1, 1));
-        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 2), new ItemStack(ModBlocks.alchemicalFuel, 1, 2));
-
-        GameRegistry.addRecipe(new ItemStack(ModItems.inertStone), new Object[]{"sis", "igi", "sis", 's', Block.stone, 'i', Item.ingotIron, 'g', Item.ingotGold});
-        GameRegistry.addRecipe(new ItemStack(ModItems.miniumStone), new Object[]{"sss", "sis", "sss", 's', ModItems.miniumShard, 'i', ModItems.inertStone});
-        CraftingManager.getInstance().getRecipeList().add(new ShapedOreRecipe(new ItemStack(ModItems.diviningRod), new Object[]{" s ", " s ", "s s", 's', Item.stick}));
-    }
 }

src/main/java/com/pahimar/ee3/helper/DebugHelper.java

@@ -4,7 +4,7 @@ import com.pahimar.ee3.api.OreStack;
 import com.pahimar.ee3.api.WrappedStack;
 import com.pahimar.ee3.emc.EmcRegistry;
 import com.pahimar.ee3.emc.EmcValue;
-import com.pahimar.ee3.item.crafting.RecipeRegistry;
+import com.pahimar.ee3.recipe.RecipeRegistry;
 import cpw.mods.fml.common.registry.GameRegistry;
 import net.minecraft.item.ItemStack;
 import net.minecraftforge.oredict.OreDictionary;

src/main/java/com/pahimar/ee3/imc/InterModCommsHandler.java

@@ -9,8 +9,8 @@ import com.pahimar.ee3.api.WrappedStack;
 import com.pahimar.ee3.emc.EmcRegistry;
 import com.pahimar.ee3.emc.EmcValue;
 import com.pahimar.ee3.emc.EmcValuesIMC;
-import com.pahimar.ee3.item.crafting.RecipesIMC;
 import com.pahimar.ee3.lib.Reference;
+import com.pahimar.ee3.recipe.RecipesIMC;
 import cpw.mods.fml.common.IScheduledTickHandler;
 import cpw.mods.fml.common.ITickHandler;
 import cpw.mods.fml.common.TickType;

src/main/java/com/pahimar/ee3/item/crafting/RecipesEquivalentExchange.java

@@ -0,0 +1,43 @@
+package com.pahimar.ee3.item.crafting;
+
+import com.pahimar.ee3.block.ModBlocks;
+import com.pahimar.ee3.item.ModItems;
+import cpw.mods.fml.common.registry.GameRegistry;
+import net.minecraft.block.Block;
+import net.minecraft.item.Item;
+import net.minecraft.item.ItemStack;
+import net.minecraft.item.crafting.CraftingManager;
+import net.minecraftforge.oredict.ShapedOreRecipe;
+
+public class RecipesEquivalentExchange
+{
+    public static void init()
+    {
+        initBlockRecipes();
+        initItemRecipes();
+    }
+
+    private static void initBlockRecipes()
+    {
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 0), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 0)});
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 1), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 1)});
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.alchemicalFuel, 1, 2), new Object[]{"iii", "iii", "iii", 'i', new ItemStack(ModItems.alchemicalFuel, 1, 2)});
+
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.chalk), new Object[]{"bcb", "cbc", "bcb", 'b', new ItemStack(Item.dyePowder.itemID, 1, 15), 'c', new ItemStack(Item.clay)});
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.chalk), new Object[]{"cc", "cc", 'c', new ItemStack(ModItems.chalk)});
+
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.glassBell), new Object[]{"iii", "i i", "i i", 'i', Block.glass});
+        GameRegistry.addRecipe(new ItemStack(ModBlocks.aludelBase), new Object[]{"iii", "sis", "iii", 'i', Item.ingotIron, 's', Block.stone});
+    }
+
+    private static void initItemRecipes()
+    {
+        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 0), new ItemStack(ModBlocks.alchemicalFuel, 1, 0));
+        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 1), new ItemStack(ModBlocks.alchemicalFuel, 1, 1));
+        GameRegistry.addShapelessRecipe(new ItemStack(ModItems.alchemicalFuel, 9, 2), new ItemStack(ModBlocks.alchemicalFuel, 1, 2));
+
+        GameRegistry.addRecipe(new ItemStack(ModItems.inertStone), new Object[]{"sis", "igi", "sis", 's', Block.stone, 'i', Item.ingotIron, 'g', Item.ingotGold});
+        GameRegistry.addRecipe(new ItemStack(ModItems.miniumStone), new Object[]{"sss", "sis", "sss", 's', ModItems.miniumShard, 'i', ModItems.inertStone});
+        CraftingManager.getInstance().getRecipeList().add(new ShapedOreRecipe(new ItemStack(ModItems.diviningRod), new Object[]{" s ", " s ", "s s", 's', Item.stick}));
+    }
+}

src/main/java/com/pahimar/ee3/item/crafting/RecipesTransmutationStones.java

@@ -0,0 +1,14 @@
+package com.pahimar.ee3.item.crafting;
+
+public class RecipesTransmutationStones
+{
+    public static void init()
+    {
+
+    }
+
+    private static void registerTransmutationRecipes()
+    {
+
+    }
+}

src/main/java/com/pahimar/ee3/recipe/RecipeRegistry.java

@@ -1,4 +1,4 @@
-package com.pahimar.ee3.item.crafting;
+package com.pahimar.ee3.recipe;
 
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.Multimap;

src/main/java/com/pahimar/ee3/recipe/RecipesFluidContainers.java

@@ -1,4 +1,4 @@
-package com.pahimar.ee3.item.crafting;
+package com.pahimar.ee3.recipe;
 
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.Multimap;

src/main/java/com/pahimar/ee3/recipe/RecipesIMC.java

@@ -1,4 +1,4 @@
-package com.pahimar.ee3.item.crafting;
+package com.pahimar.ee3.recipe;
 
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.Multimap;

src/main/java/com/pahimar/ee3/recipe/RecipesPotions.java

@@ -1,4 +1,4 @@
-package com.pahimar.ee3.item.crafting;
+package com.pahimar.ee3.recipe;
 
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.Multimap;

src/main/java/com/pahimar/ee3/recipe/RecipesVanilla.java

@@ -1,4 +1,4 @@
-package com.pahimar.ee3.item.crafting;
+package com.pahimar.ee3.recipe;
 
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.Multimap;