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Code Issues Projects Releases Packages Wiki Activity Actions 2

SPAdes: init at 3.13.1 (#63082)

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Bruno Bzeznik 2019-10-03 11:18:48 +02:00 committed by zimbatm
parent eef286ca53
commit 1ba3f3f00f
2 changed files with 29 additions and 0 deletions
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27
pkgs/applications/science/biology/spades/default.nix Normal file
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@ -0,0 +1,27 @@
{ stdenv, fetchurl, zlib, bzip2, cmake }:
stdenv.mkDerivation rec {
pname = "SPAdes";
version = "3.13.1";
src = fetchurl {
url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz";
sha256 = "0giayz197lmq2108filkn9izma3i803sb3iskv9hs5snzdr9p8ld";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ zlib bzip2 ];
doCheck = true;
sourceRoot = "${pname}-${version}/src";
meta = with stdenv.lib; {
description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
license = licenses.gpl2;
homepage = "http://cab.spbu.ru/software/spades/";
platforms = platforms.unix;
maintainers = [ maintainers.bzizou ];
};
}

2
pkgs/top-level/all-packages.nix
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@ -23085,6 +23085,8 @@ in
seaview = callPackage ../applications/science/biology/seaview { };
SPAdes = callPackage ../applications/science/biology/spades { };
trimal = callPackage ../applications/science/biology/trimal { };
varscan = callPackage ../applications/science/biology/varscan { };