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Code Issues Projects Releases Packages Wiki Activity Actions 2

pythonPackages.tiledb: 0.5.6 -> 0.6.6

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include a few improvements to tests
This commit is contained in:
Robert Scott 2020-09-05 18:23:21 +01:00
parent 33b860eca1
commit 438d5b6b61
1 changed files with 11 additions and 4 deletions
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15
pkgs/development/python-modules/tiledb/default.nix
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@ -3,28 +3,31 @@
, buildPythonPackage
, fetchFromGitHub
, cython
, pybind11
, tiledb
, numpy
, wheel
, isPy3k
, setuptools_scm
, psutil
, pandas
}:
buildPythonPackage rec {
pname = "tiledb";
version = "0.5.6";
version = "0.6.6";
format = "setuptools";
src = fetchFromGitHub {
owner = "TileDB-Inc";
repo = "TileDB-Py";
rev = version;
sha256 = "0cgm4dhyqay26xmrzlv21ha8qh55m4q3yr338lrv81ngz77zxsvw";
sha256 = "0b2kn1xyf7d994kz29dpqiaf8yzvx0axw4yqi854c54pl22ddgzl";
};
nativeBuildInputs = [
cython
pybind11
setuptools_scm
];
@ -39,6 +42,8 @@ buildPythonPackage rec {
checkInputs = [
psutil
# optional
pandas
];
TILEDB_PATH = tiledb;
@ -57,16 +62,18 @@ buildPythonPackage rec {
"test_docs" "dont_test_docs"
# these tests don't always fail
substituteInPlace tiledb/tests/test_libtiledb.py --replace \
"test_varlen_write_int_subarray" "dont_test_varlen_write_int_subarray"
"test_varlen_write_int_subarray" "dont_test_varlen_write_int_subarray" \
--replace "test_memory_cleanup" "dont_test_memory_cleanup"
substituteInPlace tiledb/tests/test_metadata.py --replace \
"test_metadata_consecutive" "dont_test_metadata_consecutive"
'';
checkPhase = ''
pushd "$out"
pushd "$TMPDIR"
${python.interpreter} -m unittest tiledb.tests.all.suite_test
popd
'';
pythonImportsCheck = [ "tiledb" ];
meta = with lib; {
description = "Python interface to the TileDB storage manager";