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Code Issues Projects Releases Packages Wiki Activity Actions 2

aragorn: init at 1.2.38 (#58354)

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Bruno Bzeznik 2019-04-29 13:18:04 +02:00 committed by Aaron Andersen
parent 39e9fc5ef4
commit 83886b3d91
2 changed files with 30 additions and 0 deletions
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28
pkgs/applications/science/biology/aragorn/default.nix Normal file
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@ -0,0 +1,28 @@
{ stdenv, fetchurl }:
stdenv.mkDerivation rec {
version = "1.2.38";
pname = "aragorn";
src = fetchurl {
url = "http://mbio-serv2.mbioekol.lu.se/ARAGORN/Downloads/${pname}${version}.tgz";
sha256 = "09i1rg716smlbnixfm7q1ml2mfpaa2fpn3hwjg625ysmfwwy712b";
};
buildPhase = ''
gcc -O3 -ffast-math -finline-functions -o aragorn aragorn${version}.c
'';
installPhase = ''
mkdir -p $out/bin && cp aragorn $out/bin
mkdir -p $out/man/1 && cp aragorn.1 $out/man/1
'';
meta = with stdenv.lib; {
description = "Detects tRNA, mtRNA, and tmRNA genes in nucleotide sequences";
homepage = http://mbio-serv2.mbioekol.lu.se/ARAGORN/;
license = licenses.gpl2;
maintainers = [ maintainers.bzizou ];
platforms = platforms.unix;
};
}

2
pkgs/top-level/all-packages.nix
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@ -21941,6 +21941,8 @@ in
ants = callPackage ../applications/science/biology/ants { };
aragorn = callPackage ../applications/science/biology/aragorn { };
archimedes = callPackage ../applications/science/electronics/archimedes {
stdenv = overrideCC stdenv gcc49;
};