From b1d95dca5645c107f49873ad5ab08e6d01c416cf Mon Sep 17 00:00:00 2001
From: Vikram Narayanan <vikram186@gmail.com>
Date: Tue, 30 Nov 2021 21:03:43 -0800
Subject: [PATCH] mrtrix: 3.0.2 -> unstable-2021-11-25

The latest stable version fails to build with latest eigen (> 3).
https://github.com/MRtrix3/mrtrix3/pull/2368
---
 pkgs/applications/science/biology/mrtrix/default.nix | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

diff --git a/pkgs/applications/science/biology/mrtrix/default.nix b/pkgs/applications/science/biology/mrtrix/default.nix
index e0b122778d1b..10bfb633f4af 100644
--- a/pkgs/applications/science/biology/mrtrix/default.nix
+++ b/pkgs/applications/science/biology/mrtrix/default.nix
@@ -1,17 +1,17 @@
 { stdenv, lib, fetchFromGitHub, python, makeWrapper
 , eigen, fftw, libtiff, libpng, zlib, ants, bc
 , qt5, libGL, libGLU, libX11, libXext
-, withGui ? true }:
+, withGui ? true, less }:
 
 stdenv.mkDerivation rec {
   pname = "mrtrix";
-  version = "3.0.2";
+  version = "unstable-2021-11-25";
 
   src = fetchFromGitHub {
     owner  = "MRtrix3";
     repo   = "mrtrix3";
-    rev    = version;
-    sha256 = "0p4d1230j6664rnb9l65cpyfj9ncbcm39yv1r9y77br9rkkv1za3";
+    rev    = "994498557037c9e4f7ba67f255820ef84ea899d9";
+    sha256 = "sha256-8eFDS5z4ZxMzi9Khk90KAS4ndma/Syd6JDXM2Fpr0M8=";
     fetchSubmodules = true;
   };
 
@@ -44,6 +44,9 @@ stdenv.mkDerivation rec {
 
     substituteInPlace ./run_tests  \
       --replace 'git submodule update --init $datadir >> $LOGFILE 2>&1' ""
+
+    substituteInPlace ./build  \
+      --replace '"less -RX "' '"${less}/bin/less -RX "'
   '';
 
   configurePhase = ''