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macs2: init at 2.2.7.1

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Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Renamed package, updated version, set pypi, and added import test.

Update pkgs/applications/science/biology/MACS2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Add comment about error for checking.

Two spaces indent.
This commit is contained in:
Gregory W. Schwartz 2021-04-05 12:15:03 -04:00
parent 926fd178ba
commit b7763a8287
2 changed files with 27 additions and 0 deletions
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25
pkgs/applications/science/biology/MACS2/default.nix Normal file
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@ -0,0 +1,25 @@
{ lib, python3, fetchurl }:
python3.pkgs.buildPythonPackage rec {
pname = "MACS2";
version = "2.2.7.1";
src = python3.pkgs.fetchPypi {
inherit pname version;
sha256 = "1rcxj943kgzs746f5jrb72x1cp4v50rk3qmad0m99a02vndscb5d";
};
propagatedBuildInputs = with python3.pkgs; [ numpy ];
# To prevent ERROR: diffpeak_cmd (unittest.loader._FailedTest) for obsolete
# function (ImportError: Failed to import test module: diffpeak_cmd)
doCheck = false;
pythonImportsCheck = [ "MACS2" ];
meta = with lib; {
description = "Model-based Analysis for ChIP-Seq";
license = licenses.bsd3;
maintainers = with maintainers; [ gschwartz ];
platforms = platforms.linux;
};
}

2
pkgs/top-level/all-packages.nix
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@ -28370,6 +28370,8 @@ in
macse = callPackage ../applications/science/biology/macse { };
MACS2 = callPackage ../applications/science/biology/MACS2 { };
migrate = callPackage ../applications/science/biology/migrate { };
minia = callPackage ../applications/science/biology/minia {