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truvari:1.3.2->1.3.4

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scalavision 2020-02-24 17:58:21 +01:00 committed by Frederik Rietdijk
parent f4c29ebfc2
commit dbb4826457
1 changed files with 5 additions and 4 deletions
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9
pkgs/applications/science/biology/truvari/default.nix
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@ -5,13 +5,13 @@
python3Packages.buildPythonApplication rec {
pname = "truvari";
version = "1.3.2";
version = "1.3.4";
src = fetchFromGitHub {
owner = "spiralgenetics";
repo = "truvari";
rev = "v${version}";
sha256 = "0wmjz8nzibvj0ixky1m0qi7iyd204prk7glbvig1cvaab33k19f1";
sha256 = "1bph7v48s7pyfagz8a2fzl5fycjliqzn5lcbv3m2bp2ih1f1gd1v";
};
propagatedBuildInputs = with python3Packages; [
@ -25,8 +25,9 @@ python3Packages.buildPythonApplication rec {
prePatch = ''
substituteInPlace ./setup.py \
--replace '"progressbar2==3.41.0",' "" \
--replace '"pysam==0.15.2",' ""
--replace '"progressbar2==3.41.0",' '"progressbar2==3.47.0",' \
--replace '"pysam==0.15.2",' '"pysam==0.15.4",' \
--replace '"pyfaidx==0.5.5.2",' '"pyfaidx==0.5.8",'
'';
meta = with lib; {