R. RyanTM afb809f30b kssd: 1.0 -> 1.1		2020-08-14 15:06:11 +00:00
..
ants	vtk: 7.1.1 -> 8.2.0	2020-05-11 17:54:29 -04:00
aragorn
bayescan
bcftools
bedtools
bftools
blast
bowtie2
bppsuite	bppsuite: init at 2.4.1	2020-05-25 21:13:02 -04:00
bwa
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix	dcm2niix: 1.0.20190902 -> 1.0.20200331	2020-05-02 10:16:22 +02:00
deeptools
delly
diamond
ecopcr
eggnog-mapper
emboss	emboss: fix license	2020-06-26 11:05:24 +02:00
est-sfs
exonerate
EZminc	ezminc: switch from itk5 to itk4 branch	2020-05-05 00:08:04 -04:00
freebayes
hisat2
hmmer	hmmer: enable on darwin	2020-07-28 13:47:34 -05:00
igv
inormalize
itsx	itsx: enable on darwin	2020-07-28 13:48:55 -05:00
iv
kallisto
kssd	kssd: 1.0 -> 1.1	2020-08-14 15:06:11 +00:00
last	last: 1061 -> 1066	2020-07-05 08:43:25 +00:00
macse
manta
megahit
messer-slim
migrate
minc-tools	minc-tools: actually build Nifti support	2020-07-06 11:09:33 -04:00
minc-widgets
minia
minimap2
mni_autoreg
mosdepth	mosdepth: 0.2.6 -> 0.2.9	2020-04-21 19:42:05 +02:00
mrbayes	mrbayes: fix license	2020-06-26 11:06:35 +02:00
mrtrix	mrtrix: 3.0_RC3_latest -> 3.0.0	2020-04-28 10:37:06 -04:00
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg
octopus
paml
picard-tools	picard-tools: 2.23.1 -> 2.23.3	2020-08-02 10:04:36 +00:00
platypus
plink
plink-ng
poretools
prodigal
quast	Quast: init at 5.0.2	2020-04-24 10:11:54 +02:00
raxml
samtools
seaview	seaview: 5.0.2 -> 5.0.4	2020-07-07 13:30:35 +00:00
snpeff
somatic-sniper
sortmerna	sortmerna: 3.0.3 -> 4.2.0	2020-07-18 18:06:23 +02:00
spades	SPAdes: 3.14.0 -> 3.14.1	2020-05-10 13:06:19 +00:00
stacks	stacks: 2.52 -> 2.53	2020-05-10 09:37:29 -07:00
star
strelka
sumatools
svaba
tebreak	tebreak: 1.0 -> 1.1	2020-07-04 10:45:49 +00:00
trimal
truvari
varscan
vcftools
xenomapper