diff --git a/synapse/handlers/appservice.py b/synapse/handlers/appservice.py
index ec9fe01a5..ee41aed69 100644
--- a/synapse/handlers/appservice.py
+++ b/synapse/handlers/appservice.py
@@ -23,6 +23,7 @@ from twisted.internet import defer
 
 import synapse
 from synapse.api.constants import EventTypes
+from synapse.metrics.background_process_metrics import run_as_background_process
 from synapse.util.logcontext import make_deferred_yieldable, run_in_background
 from synapse.util.metrics import Measure
 
@@ -106,7 +107,9 @@ class ApplicationServicesHandler(object):
                             yield self._check_user_exists(event.state_key)
 
                         if not self.started_scheduler:
-                            self.scheduler.start().addErrback(log_failure)
+                            def start_scheduler():
+                                return self.scheduler.start().addErrback(log_failure)
+                            run_as_background_process("as_scheduler", start_scheduler)
                             self.started_scheduler = True
 
                         # Fork off pushes to these services
diff --git a/synapse/handlers/initial_sync.py b/synapse/handlers/initial_sync.py
index 50b13d882..40e7580a6 100644
--- a/synapse/handlers/initial_sync.py
+++ b/synapse/handlers/initial_sync.py
@@ -148,13 +148,15 @@ class InitialSyncHandler(BaseHandler):
             try:
                 if event.membership == Membership.JOIN:
                     room_end_token = now_token.room_key
-                    deferred_room_state = self.state_handler.get_current_state(
-                        event.room_id
+                    deferred_room_state = run_in_background(
+                        self.state_handler.get_current_state,
+                        event.room_id,
                     )
                 elif event.membership == Membership.LEAVE:
                     room_end_token = "s%d" % (event.stream_ordering,)
-                    deferred_room_state = self.store.get_state_for_events(
-                        [event.event_id], None
+                    deferred_room_state = run_in_background(
+                        self.store.get_state_for_events,
+                        [event.event_id], None,
                     )
                     deferred_room_state.addCallback(
                         lambda states: states[event.event_id]