# Copyright (c) 2020, NVIDIA CORPORATION. All rights reserved. # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright # notice, this list of conditions and the following disclaimer. # * Redistributions in binary form must reproduce the above copyright # notice, this list of conditions and the following disclaimer in the # documentation and/or other materials provided with the distribution. # * Neither the name of the NVIDIA CORPORATION nor the # names of its contributors may be used to endorse or promote products # derived from this software without specific prior written permission. # THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND # ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED # WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE # DISCLAIMED. IN NO EVENT SHALL NVIDIA CORPORATION BE LIABLE FOR ANY # DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES # (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; # LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND # ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT # (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS # SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. import matplotlib.pyplot as plt import numpy as np import cv2 import data as global_data plt.switch_backend('Agg') def image_plot(x, name='image'): fig, ax = plt.subplots() ax.imshow(x, cmap='magma', aspect='auto') fig.canvas.draw() buf = np.array(fig.canvas.renderer._renderer) plt.clf() plt.close('all') cv2.imshow(name, buf) cv2.waitKey(0) def plot_to_buf(x, align=True): fig, ax = plt.subplots() ax.plot(x) if align: ax.set_ylim([-1, 1]) fig.canvas.draw() im = np.array(fig.canvas.renderer._renderer) plt.clf() plt.close('all') return np.rollaxis(im[..., :3], 2) def imshow_to_buf(x, scale01=False): def softmax(x): """Compute softmax values for each sets of scores in x.""" return np.exp(x) / np.sum(np.exp(x), axis=0) if scale01: x = (x - x.min()) / (x.max() - x.min()) if x.max() > 1.: x = softmax(x) if len(x.shape) == 3: x = x[0] fig, ax = plt.subplots() ax.imshow(x, cmap='magma', aspect='auto') fig.canvas.draw() im = np.array(fig.canvas.renderer._renderer) plt.clf() plt.close('all') return np.rollaxis(im[..., :3], 2) def origin_to_chrs(target): results = [] for t in target: idx = t - 1 if t - 1 >= 0 else 0 if idx < len(global_data.idx2chr): results.append(global_data.idx2chr[idx]) else: break return ''.join(results)