DeepLearningExamples/TensorFlow/Segmentation/UNet_3D_Medical/model/unet3d.py
Przemek Strzelczyk 79d4ced0be Adding 3DUnet/TF
2020-07-04 03:28:33 +02:00

83 lines
3.2 KiB
Python

# Copyright (c) 2020, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from model.layers import downsample_block, upsample_block, output_layer, input_block
class Builder:
def __init__(self, n_classes, mode, normalization='none'):
self._n_classes = n_classes
self._mode = mode
self._normalization = normalization
def __call__(self, features):
skip_128 = input_block(x=features,
out_channels=32,
normalization=self._normalization,
mode=self._mode)
skip_64 = downsample_block(x=skip_128,
out_channels=64,
normalization=self._normalization,
mode=self._mode)
skip_32 = downsample_block(x=skip_64,
out_channels=128,
normalization=self._normalization,
mode=self._mode)
skip_16 = downsample_block(x=skip_32,
out_channels=256,
normalization=self._normalization,
mode=self._mode)
skip_8 = downsample_block(x=skip_16,
out_channels=320,
normalization=self._normalization,
mode=self._mode)
x = downsample_block(x=skip_8,
out_channels=320,
normalization=self._normalization,
mode=self._mode)
x = upsample_block(x, skip_8,
out_channels=320,
normalization=self._normalization,
mode=self._mode)
x = upsample_block(x, skip_16,
out_channels=256,
normalization=self._normalization,
mode=self._mode)
x = upsample_block(x, skip_32,
out_channels=128,
normalization=self._normalization,
mode=self._mode)
x = upsample_block(x, skip_64,
out_channels=64,
normalization=self._normalization,
mode=self._mode)
x = upsample_block(x, skip_128,
out_channels=32,
normalization=self._normalization,
mode=self._mode)
return output_layer(x=x,
out_channels=self._n_classes,
activation='softmax')