diff --git a/x-pack/plugins/fleet/server/services/preconfiguration.ts b/x-pack/plugins/fleet/server/services/preconfiguration.ts
index d171030b06a8..00c455247826 100644
--- a/x-pack/plugins/fleet/server/services/preconfiguration.ts
+++ b/x-pack/plugins/fleet/server/services/preconfiguration.ts
@@ -20,7 +20,11 @@ import type {
   PreconfigurationError,
   PreconfiguredOutput,
 } from '../../common';
-import { AGENT_POLICY_SAVED_OBJECT_TYPE, normalizeHostsForAgents } from '../../common';
+import {
+  AGENT_POLICY_SAVED_OBJECT_TYPE,
+  SO_SEARCH_LIMIT,
+  normalizeHostsForAgents,
+} from '../../common';
 import {
   PRECONFIGURATION_DELETION_RECORD_SAVED_OBJECT_TYPE,
   PRECONFIGURATION_LATEST_KEYWORD,
@@ -33,7 +37,7 @@ import { ensurePackagesCompletedInstall } from './epm/packages/install';
 import { bulkInstallPackages } from './epm/packages/bulk_install_packages';
 import { agentPolicyService, addPackageToAgentPolicy } from './agent_policy';
 import type { InputsOverride } from './package_policy';
-import { overridePackageInputs } from './package_policy';
+import { overridePackageInputs, packagePolicyService } from './package_policy';
 import { appContextService } from './app_context';
 import type { UpgradeManagedPackagePoliciesResult } from './managed_package_policies';
 import { upgradeManagedPackagePolicies } from './managed_package_policies';
@@ -349,14 +353,16 @@ export async function ensurePreconfiguredPackagesAndPolicies(
     }
   }
 
-  const fulfilledPolicyPackagePolicyIds = fulfilledPolicies
-    .filter(({ policy }) => policy?.package_policies)
-    .flatMap<string>(({ policy }) => policy?.package_policies as string[]);
-
+  // Handle automatic package policy upgrades for managed packages and package with
+  // the `keep_policies_up_to_date` setting enabled
+  const allPackagePolicyIds = await packagePolicyService.listIds(soClient, {
+    page: 1,
+    perPage: SO_SEARCH_LIMIT,
+  });
   const packagePolicyUpgradeResults = await upgradeManagedPackagePolicies(
     soClient,
     esClient,
-    fulfilledPolicyPackagePolicyIds
+    allPackagePolicyIds.items
   );
 
   return {